Basic Information
Locus ID:
Thhalv10000051m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_15 | 3089591 | 3093135 | - | Thhalv10000051m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 89,108.06 Da | 61.25 | 76.64 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 172 | 2.72743E-64 | - |
| Pfam | PF00582 | Universal stress protein family | 21 | 146 | 1.8E-10 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 494 | 750 | 6.4E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 752 | 1.2E-67 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 21 | 146 | 5.61E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 566 | 775 | 1.8E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 471 | 565 | 2.2E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 20 | 152 | 3.6E-13 | IPR014729 |
| SMART | SM00220 | serkin_6 | 493 | 756 | 2.2E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 493 | 756 | 35.184486 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 611 | 623 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 361 | - | - |
| Coils | Coil | Coil | 385 | 468 | - | - |
| Coils | Coil | Coil | 359 | 379 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006404968.1 | U-box domain-containing protein 52 isoform X1 [Eutrema salsugineum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | V4NJE9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000051mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology