Basic Information
Locus ID:
Telscf8801G000100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold88 | 24356 | 31150 | + | Telscf8801G000100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 68,454.15 Da | 39.51 | 93.58 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 300 | 570 | 2.2E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 62 | 1.8E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 278 | 574 | 1.05E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 197 | 3.74E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 208 | 5.1E-63 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 593 | 8.5E-70 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 8.3E-40 | - |
| Gene3D | G3DSA:1.20.5.510 | Single helix bin | 224 | 263 | 1.1E-5 | - |
| SMART | SM00220 | serkin_6 | 299 | 573 | 4.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 586 | 37.134979 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 422 | 434 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_044962504.1 | LRR receptor kinase BAK1 [Hordeum vulgare subsp. vulgare] | 0 |
| B8BB68 | LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YDP9 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology