Basic Information
Locus ID:
Tel7E01G941200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 696343872 | 696361118 | + | Tel7E01G941200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 78,687.99 Da | 35.04 | 82.70 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 417 | 642 | 3.99483E-41 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 464 | 503 | 0.09 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 596 | 632 | 3.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 554 | 591 | 1.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 508 | 547 | 0.015 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 38 | 321 | 1.8E-49 | IPR000719 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 417 | 665 | 2.01E-47 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 349 | 2.73E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 104 | 1.0E-25 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 396 | 674 | 8.4E-69 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 339 | 1.6E-50 | - |
| SMART | SM00320 | WD40_4 | 507 | 547 | 6.6E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 594 | 632 | 1.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 419 | 458 | 0.15 | IPR001680 |
| SMART | SM00220 | serkin_6 | 34 | 323 | 3.3E-38 | IPR000719 |
| SMART | SM00320 | WD40_4 | 550 | 591 | 7.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 462 | 503 | 4.9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 514 | 550 | 9.731054 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 557 | 593 | 10.258324 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 557 | 600 | 13.783434 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 335 | 38.49184 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 600 | 632 | 9.493783 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 600 | 632 | 11.343905 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 514 | 556 | 12.513543 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 578 | 592 | - | IPR019775 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 619 | 633 | 2.4E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 534 | 548 | 2.4E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 578 | 592 | 2.4E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 695 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_037467492.1 | uncharacterized protein LOC119339605 [Triticum dicoccoides] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SPR7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH04.534 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0670760, gene-QOZ80_9AG0675630 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0495000.1, HORVU.MOREX.r3.5HG0495010.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_026497, gene-QYE76_036873, gene-QYE76_036877 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G077900, gene-BS78_05G087600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0401770, Pt_Chr0505685 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G007950 |
| Poaceae | Thinopyrum elongatum | 4 | Tel5E01G468300, Tel6E01G025100, Tel7E01G888400 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5BG047840, gene_TRIDC5BG047850 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS3A02G094800.1, TraesCS3D02G095000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb201450_P002 |