Basic Information
Locus ID:
Tel7E01G924900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 687675737 | 687676968 | + | Tel7E01G924900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 35,866.22 Da | 58.76 | 79.47 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 106 | 312 | 8.2E-7 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 82 | 1.28E-5 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 260 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80110.1 | phloem protein 2-B11. | 0 |
| RefSeq | XP_044960402.1 | F-box protein PP2-B11-like isoform X1 [Hordeum vulgare subsp. vulgare] | 0 |
| Q949S5 | F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6TMG6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.7HG0746840.1, HORVU.MOREX.r3.7HG0746860.1 ... |
| Poaceae | Oryza coarctata | 1 | Oco08G002560 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g21130.1 |
| Poaceae | Thinopyrum elongatum | 4 | Tel7E01G924800, Tel7E01G924900, Tel7E01G925100 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC7AG074080, gene_TRIDC7AG074090 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS7A02G530500.1, TraesCS7A02G530600.1 ... |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1686 |
| Salicaceae | Populus euphratica | 1 | populus_peu13027 |