HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel7E01G924800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: carbohydrate binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 687655220 687655978 + Tel7E01G924800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.20 7,529.52 Da 46.60 99.18 0.42
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 5 59 3.92E-10 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044960389.1 F-box protein PP2-B11-like [Hordeum vulgare subsp. vulgare] 0
TrEMBL A0A8I6ZFJ3 F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.7HG0746840.1, HORVU.MOREX.r3.7HG0746860.1 ...
HORVU.MOREX.r3.7HG0746960.1.CDS1, HORVU.MOREX.r3.7HG0747100.1.CDS1
Poaceae Oryza coarctata 1 Oco08G002560
Poaceae Oryza sativa 1 LOC_Os04g21130.1
Poaceae Thinopyrum elongatum 4 Tel7E01G924800, Tel7E01G924900, Tel7E01G925100 ...
Tel7E01G926300
Poaceae Triticum dicoccoides 4 gene_TRIDC7AG074080, gene_TRIDC7AG074090 ...
gene_TRIDC7AG074100, gene_TRIDC7AG074200
Poaceae Triticum aestivum 8 TraesCS7A02G530500.1, TraesCS7A02G530600.1 ...
TraesCS7A02G531700.1, TraesCS7B02G448100.1, TraesCS7B02G449100.1, TraesCS7D02G518300.2, TraesCS7D02G518400.1, TraesCS7D02G519100.1
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-1686
Salicaceae Populus euphratica 1 populus_peu13027
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.