Basic Information
Locus ID:
Tel7E01G890400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
von Willebrand factor (vWF) type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 670653043 | 670656988 | + | Tel7E01G890400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 79,931.05 Da | 41.96 | 80.59 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00198 | vWFA | 610 | 684 | 0.00116543 | - |
| CDD | cd00198 | vWFA | 411 | 485 | 5.24243E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 18 | 290 | 1.5E-48 | IPR000719 |
| SUPERFAMILY | SSF53300 | vWA-like | 333 | 494 | 7.12E-7 | IPR036465 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 292 | 1.34E-63 | IPR011009 |
| SUPERFAMILY | SSF53300 | vWA-like | 527 | 703 | 2.47E-5 | IPR036465 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 311 | 3.1E-66 | - |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 374 | 504 | 5.7E-7 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 574 | 704 | 1.6E-5 | IPR036465 |
| SMART | SM00220 | serkin_6 | 17 | 290 | 2.5E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 308 | 36.159733 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 44 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_044438347.1 | uncharacterized protein LOC123164820 [Triticum aestivum] | 0 |
| O64782 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana OX=3702 GN=SD129 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SNX2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0095880.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G188400, gene-BS78_05G188600, gene-BS78_K280100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205824 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G009600, Tel2E01G010800, Tel7E01G005600 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG000300, gene_TRIDC2BG000030 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS2A02G003000.1, TraesCS2B02G000200.1 ... |