Basic Information
Locus ID:
Tel7E01G888400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 669917618 | 669919180 | + | Tel7E01G888400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 27,525.81 Da | 40.65 | 71.36 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 18 | 199 | 4.4E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 219 | 2.32E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 222 | 2.5E-48 | - |
| SMART | SM00220 | serkin_6 | 3 | 210 | 5.7E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 209 | 25.573366 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 242 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_037467490.1 | putative receptor-like protein kinase At4g00960 [Triticum dicoccoides] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6TZ23 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH04.534 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0670760, gene-QOZ80_9AG0675630 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0495000.1, HORVU.MOREX.r3.5HG0495010.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_026497, gene-QYE76_036873, gene-QYE76_036877 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G077900, gene-BS78_05G087600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0401770, Pt_Chr0505685 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G007950 |
| Poaceae | Thinopyrum elongatum | 4 | Tel5E01G468300, Tel6E01G025100, Tel7E01G888400 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5BG047840, gene_TRIDC5BG047850 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS3A02G094800.1, TraesCS3D02G095000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb201450_P002 |