Basic Information
Locus ID:
Tel7E01G888300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
von Willebrand factor (vWF) type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 669908366 | 669912065 | + | Tel7E01G888300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 86,003.21 Da | 40.06 | 82.35 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 20 | 282 | 2.3E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 284 | 1.75E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 720 | 765 | 8.1E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 89 | 1.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 296 | 1.4E-40 | - |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 362 | 496 | 6.3E-6 | IPR036465 |
| SMART | SM00220 | serkin_6 | 19 | 293 | 1.6E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 293 | 29.940771 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 154 | 166 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 46 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044441165.1 | uncharacterized protein LOC123167388 [Triticum aestivum] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6TYA5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0095880.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G188400, gene-BS78_05G188600, gene-BS78_K280100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205824 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G009600, Tel2E01G010800, Tel7E01G005600 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG000300, gene_TRIDC2BG000030 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS2A02G003000.1, TraesCS2B02G000200.1 ... |