halophFGD

Basic Information

Locus ID: Tel7E01G842700

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: F-box associated domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	642940446	642941555	+	Tel7E01G842700

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.73	41,250.38 Da	45.70	101.98	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	31	63	2.7E-10	IPR001810
Pfam	PF08268	F-box associated domain	214	300	8.8E-7	IPR013187
SUPERFAMILY	SSF81383	F-box domain	31	97	5.89E-13	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	17	64	1.3E-8	-
SMART	SM00256	fbox_2	29	69	1.1E-7	IPR001810
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	145	321	3.8E-16	IPR017451
MobiDBLite	mobidb-lite	consensus disorder prediction	1	17	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	21	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G42430.1	F-box and associated interaction domains-containing protein.
RefSeq	XP_044428644.1	F-box/LRR-repeat protein At2g43260-like [Triticum aestivum]
Swiss-Prot	Q9FIH4	Putative F-box protein At5g42430 OS=Arabidopsis thaliana OX=3702 GN=At5g42430 PE=4 SV=1
TrEMBL	A0A3B6RRA0	F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	1	pistato.v30291420
Arecaceae	Phoenix dactylifera	1	gene-LOC103701671
Brassicaceae	Arabidopsis thaliana	1	AT2G41473.1
Plantaginaceae	Plantago ovata	2	Pov_00037827, Pov_00038433
Poaceae	Echinochloa crus-galli	48	AH01.2189, AH01.2195, AH03.3555, AH03.520, AH03.521 ... AH03.534, AH03.621, AH03.771, AH03.772, AH03.774, AH03.778, AH04.2085, AH04.865, AH06.2538, AH07.2230, BH01.2859, BH03.614, BH03.641, BH03.687, BH03.899, BH03.903, BH04.831, BH04.832, BH04.833, BH05.3670, BH05.609, BH06.2338, BH06.2339, BH06.2340, BH07.2292, CH02.2815, CH03.1011, CH03.1012, CH03.1013, CH03.1016, CH03.4058, CH03.699, CH03.706, CH03.710, CH03.719, CH04.2492, CH04.839, CH05.708, CH06.2562, CH06.2563, CH06.2564, CH07.107, CH07.2367
Poaceae	Eleusine coracana subsp. coracana	28	gene-QOZ80_2AG0108440, gene-QOZ80_2AG0132200 ... gene-QOZ80_2AG0132210, gene-QOZ80_2BG0162070, gene-QOZ80_2BG0162080, gene-QOZ80_2BG0187660, gene-QOZ80_5AG0387550, gene-QOZ80_5AG0388340, gene-QOZ80_5AG0398950, gene-QOZ80_5BG0447660, gene-QOZ80_6AG0547090, gene-QOZ80_7AG0559540, gene-QOZ80_7AG0559690, gene-QOZ80_7AG0559710, gene-QOZ80_7AG0559930, gene-QOZ80_7AG0562450, gene-QOZ80_7AG0562470, gene-QOZ80_7AG0562480, gene-QOZ80_7BG0590880, gene-QOZ80_7BG0590920, gene-QOZ80_7BG0590940, gene-QOZ80_7BG0590980, gene-QOZ80_7BG0591120, gene-QOZ80_7BG0591160, gene-QOZ80_7BG0591210, gene-QOZ80_8AG0629740, gene-QOZ80_8BG0658620, gene-QOZ80_8BG0658660
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.3HG0234450.1, HORVU.MOREX.r3.3HG0246530.1 ... HORVU.MOREX.r3.6HG0548950.1.CDS1, HORVU.MOREX.r3.6HG0548980.1.CDS1, HORVU.MOREX.r3.6HG0560200.1.CDS1, HORVU.MOREX.r3.6HG0567110.1, HORVU.MOREX.r3.6HG0567120.1.CDS1, HORVU.MOREX.r3.7HG0739630.1.CDS1, HORVU.MOREX.r3.7HG0739810.1.CDS1
Poaceae	Lolium multiflorum	71	gene-QYE76_003164, gene-QYE76_003165, gene-QYE76_003228 ... gene-QYE76_003229, gene-QYE76_005940, gene-QYE76_006449, gene-QYE76_007425, gene-QYE76_007426, gene-QYE76_007427, gene-QYE76_009917, gene-QYE76_009927, gene-QYE76_016247, gene-QYE76_018810, gene-QYE76_019790, gene-QYE76_019793, gene-QYE76_019795, gene-QYE76_019800, gene-QYE76_019809, gene-QYE76_019946, gene-QYE76_020019, gene-QYE76_024117, gene-QYE76_024384, gene-QYE76_026658, gene-QYE76_026823, gene-QYE76_030422, gene-QYE76_034567, gene-QYE76_036437, gene-QYE76_036439, gene-QYE76_036444, gene-QYE76_036446, gene-QYE76_036448, gene-QYE76_036449, gene-QYE76_036450, gene-QYE76_036452, gene-QYE76_036457, gene-QYE76_036458, gene-QYE76_037638, gene-QYE76_042937, gene-QYE76_046918, gene-QYE76_047312, gene-QYE76_048592, gene-QYE76_048596, gene-QYE76_049145, gene-QYE76_049286, gene-QYE76_049621, gene-QYE76_055065, gene-QYE76_055931, gene-QYE76_056377, gene-QYE76_057543, gene-QYE76_057544, gene-QYE76_059520, gene-QYE76_059840, gene-QYE76_060017, gene-QYE76_060018, gene-QYE76_060020, gene-QYE76_060365, gene-QYE76_060370, gene-QYE76_062142, gene-QYE76_062143, gene-QYE76_062144, gene-QYE76_062145, gene-QYE76_062171, gene-QYE76_062172, gene-QYE76_062173, gene-QYE76_062174, gene-QYE76_064526, gene-QYE76_067456, gene-QYE76_067457, gene-QYE76_067460, gene-QYE76_067461, gene-QYE76_069926
Poaceae	Oryza coarctata	16	Oco01G012120, Oco13G003280, Oco13G003300, Oco13G003340 ... Oco13G004400, Oco14G003120, Oco14G003130, Oco14G003580, Oco14G003600, Oco14G003610, Oco14G003630, Oco14G003650, Oco14G003680, Oco14G003720, Oco14G005030, Oco23G005920
Poaceae	Oryza sativa	12	LOC_Os05g49530.1, LOC_Os07g08570.1, LOC_Os07g08850.1 ... LOC_Os07g09710.1, LOC_Os07g09750.1, LOC_Os07g09814.2, LOC_Os07g09870.1, LOC_Os07g09880.1, LOC_Os07g09950.1, LOC_Os07g10710.1, LOC_Os07g13870.1, LOC_Os07g13890.1
Poaceae	Paspalum vaginatum	14	gene-BS78_01G479600, gene-BS78_02G068700 ... gene-BS78_02G068800, gene-BS78_02G069400, gene-BS78_02G069500, gene-BS78_02G069600, gene-BS78_02G071200, gene-BS78_02G115600, gene-BS78_02G115700, gene-BS78_03G143400, gene-BS78_04G146000, gene-BS78_05G105300, gene-BS78_05G105400, gene-BS78_10G214800
Poaceae	Puccinellia tenuiflora	20	Pt_Chr0103507, Pt_Chr0103508, Pt_Chr0103509, Pt_Chr0103511 ... Pt_Chr0202703, Pt_Chr0207151, Pt_Chr0303772, Pt_Chr0303775, Pt_Chr0303796, Pt_Chr0303804, Pt_Chr0400012, Pt_Chr0401397, Pt_Chr0401398, Pt_Chr0401399, Pt_Chr0401403, Pt_Chr0401413, Pt_Chr0401414, Pt_Chr0401416, Pt_Chr0401418, Pt_Chr0600836
Poaceae	Sporobolus alterniflorus	16	Chr06G011030, Chr15G012580, Chr20G006450, Chr24G003140 ... Chr24G003150, Chr24G003180, Chr24G003190, Chr24G003460, Chr24G004840, Chr26G001660, Chr28G002610, Chr28G002620, Chr28G002720, Chr28G004160, Chr28G005940, Chr29G006070
Poaceae	Thinopyrum elongatum	14	Tel3E01G139700, Tel3E01G139900, Tel5E01G518300 ... Tel5E01G519000, Tel5E01G519200, Tel5E01G519300, Tel5E01G828800, Tel6E01G160400, Tel6E01G163000, Tel6E01G273200, Tel6E01G295000, Tel6E01G295100, Tel7E01G754500, Tel7E01G842700
Poaceae	Triticum dicoccoides	9	gene_TRIDC2AG077760, gene_TRIDC2BG075100 ... gene_TRIDC3BG012920, gene_TRIDC3BG015590, gene_TRIDC3BG024110, gene_TRIDC5BG052180, gene_TRIDC6AG019220, gene_TRIDC6BG012510, gene_TRIDC6BG025200
Poaceae	Triticum aestivum	49	TraesCS2B02G520400.1, TraesCS2D02G060700.1.cds1 ... TraesCS2D02G492500.1, TraesCS2D02G520600.1.cds1, TraesCS2D02G556400.1.cds1, TraesCS3A02G096100.1.cds1, TraesCS3A02G135000.1, TraesCS3B02G091600.1.cds1, TraesCS3B02G111900.1.cds1, TraesCS3B02G168800.1, TraesCS3D02G079500.1.cds1, TraesCS3D02G096600.1.cds1, TraesCS3D02G151000.1, TraesCS5A02G326000.1.cds1, TraesCS5A02G326400.1.cds1, TraesCS5A02G326500.1.cds1, TraesCS5A02G326600.1.cds1, TraesCS5B02G326700.1.cds1, TraesCS5B02G326800.1.cds1, TraesCS5B02G326900.1.cds1, TraesCS5B02G327000.1.cds1, TraesCS5B02G327100.1.cds1, TraesCS5B02G534500.1.cds1, TraesCS5D02G332500.1.cds1, TraesCS5D02G332600.1.cds1, TraesCS5D02G332700.1.cds1, TraesCS5D02G332800.1.cds1, TraesCS5D02G332900.1.cds1, TraesCS5D02G333000.1.cds1, TraesCS6A02G066600.1.cds1, TraesCS6A02G140600.1, TraesCS6A02G140700.1, TraesCS6B02G089800.1.cds1, TraesCS6D02G065800.1.cds1, TraesCS6D02G066000.1.cds1, TraesCS6D02G128300.1, TraesCS6D02G130000.1, TraesCS6D02G130100.1, TraesCS7A02G492200.1, TraesCS7A02G493200.1.cds1, TraesCS7B02G397900.1.cds1, TraesCS7B02G398200.1.cds1, TraesCS7B02G399000.1.cds1, TraesCS7B02G399100.1.cds1, TraesCS7B02G399200.1.cds1, TraesCS7D02G478200.1.cds1, TraesCSU02G049800.1.cds1, TraesCSU02G076800.1.cds1, TraesCSU02G117500.1.cds1
Poaceae	Zea mays	3	Zm00001eb325430_P001, Zm00001eb407470_P001 ... Zm00001eb407480_P003
Poaceae	Zoysia japonica	9	nbis-gene-26706, nbis-gene-26708, nbis-gene-26714 ... nbis-gene-35574, nbis-gene-35576, nbis-gene-35580, nbis-gene-38811, nbis-gene-52763, nbis-gene-55664
Poaceae	Zoysia macrostachya	8	Zma_g4874, Zma_g4879, Zma_g4880, Zma_g6151, Zma_g6152 ... Zma_g6153, Zma_g6154, Zma_g6252
Solanaceae	Lycium barbarum	2	gene-LOC132610451, gene-LOC132613453