HalophFGD

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Basic Information
Locus ID: Tel7E01G827200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 635168988 635170576 + Tel7E01G827200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.56 44,345.07 Da 44.41 88.13 0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 4 42 3.5E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 4 57 2.62E-13 IPR036047
Gene3D G3DSA:1.20.1280.50 - 3 46 2.1E-7 -
SMART SM00256 fbox_2 8 48 2.0E-7 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G07610.1 F-box family protein. 0
RefSeq XP_037466647.1 uncharacterized protein LOC119338428 [Triticum dicoccoides] 0
TrEMBL A0A3B6TXZ1 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.7HG0738990.1.CDS1
Poaceae Thinopyrum elongatum 1 Tel7E01G827200
Poaceae Triticum dicoccoides 2 gene_TRIDC7AG067870, gene_TRIDC7BG061740
Poaceae Triticum aestivum 13 TraesCS6B02G041600.1.cds1, TraesCS7A02G487000.1 ...
TraesCS7A02G487200.1, TraesCS7A02G487300.1.cds1, TraesCS7A02G487700.1.cds1, TraesCS7B02G390400.1.cds1, TraesCS7B02G390500.1.cds1, TraesCS7B02G390600.1.cds1, TraesCS7D02G473500.1, TraesCS7D02G473600.1, TraesCS7D02G474000.1.cds1, TraesCS7D02G474100.1.cds1, TraesCS7D02G474400.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.