halophFGD

Basic Information

Locus ID: Tel7E01G755700

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: F-Box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	590458663	590460778	+	Tel7E01G755700

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.08	69,204.59 Da	57.53	90.36	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF52047	RNI-like	158	368	9.02E-9	-
SUPERFAMILY	SSF81383	F-box domain	31	71	2.62E-7	IPR036047
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	29	265	1.5E-10	IPR032675
MobiDBLite	mobidb-lite	consensus disorder prediction	1	29	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	487	501	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	12	29	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	429	481	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	427	518	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G26922.4	-
RefSeq	XP_037461387.1	uncharacterized protein LOC119332308 [Triticum dicoccoides]
Swiss-Prot	Q9LJF8	F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 PE=2 SV=2
TrEMBL	A0A3B6RLT7	FBD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg6181
Aizoaceae	Mesembryanthemum crystallinum	1	gene_2053
Amaranthaceae	Atriplex hortensis	1	Ah008888
Arecaceae	Cocos nucifera	2	COCNU_04G007350, COCNU_04G007380
Arecaceae	Phoenix dactylifera	3	gene-LOC103717301, gene-LOC103718683, gene-LOC103719349
Asparagaceae	Asparagus officinalis	8	AsparagusV1_03.2306.V1.1, AsparagusV1_03.939.V1.1 ... AsparagusV1_03.940.V1.1, AsparagusV1_03.941.V1.1, AsparagusV1_06.280.V1.1, AsparagusV1_07.3941.V1.1, AsparagusV1_08.1220.V1.1, AsparagusV1_08.1221.V1.1
Plantaginaceae	Plantago ovata	2	Pov_00019973, Pov_00040073
Poaceae	Echinochloa crus-galli	22	AH06.2738, AH06.2740, AH06.2743, AH06.2746, AH06.2747 ... AH07.435, BH06.2537, BH06.2538, BH06.2539, BH06.2540, BH06.2542, BH06.2544, BH06.2545, BH07.559, CH06.2839, CH06.2840, CH06.2841, CH06.2845, CH06.2847, CH06.2848, CH06.2849, CH07.420
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_2AG0102240, gene-QOZ80_2BG0155600 ... gene-QOZ80_6AG0548510, gene-QOZ80_6AG0548560, gene-QOZ80_6AG0548580, gene-QOZ80_6AG0548590, gene-QOZ80_6BG0502190, gene-QOZ80_6BG0502240, gene-QOZ80_6BG0502250
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.2HG0196820.1, HORVU.MOREX.r3.6HG0564870.1 ... HORVU.MOREX.r3.7HG0731930.1, HORVU.MOREX.r3.7HG0747800.1, HORVU.MOREX.r3.7HG0747810.1, HORVU.MOREX.r3.7HG0747870.1, HORVU.MOREX.r3.7HG0747880.1
Poaceae	Lolium multiflorum	10	gene-QYE76_005122, gene-QYE76_017618, gene-QYE76_020634 ... gene-QYE76_035678, gene-QYE76_035888, gene-QYE76_035891, gene-QYE76_041859, gene-QYE76_041880, gene-QYE76_045670, gene-QYE76_066101
Poaceae	Oryza coarctata	7	Oco02G006440, Oco02G006460, Oco03G002930, Oco04G002880 ... Oco11G015500, Oco12G015830, Oco12G015850
Poaceae	Oryza sativa	4	LOC_Os01g13910.1, LOC_Os02g06520.1, LOC_Os06g47100.1 ... LOC_Os06g47120.1
Poaceae	Paspalum vaginatum	4	gene-BS78_04G044700, gene-BS78_10G235400 ... gene-BS78_10G235500, gene-BS78_10G239600
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0202543, Pt_Chr0202552, Pt_Chr0307263, Pt_Chr0307311 ... Pt_Chr0401185
Poaceae	Sporobolus alterniflorus	9	Chr02G032030, Chr02G032040, Chr05G010020, Chr05G010030 ... Chr05G010040, Chr06G034690, Chr10G020680, Chr15G026010, Chr29G011100
Poaceae	Thinopyrum elongatum	9	Tel1E01G463200, Tel2E01G766500, Tel5E01G370100 ... Tel6E01G283600, Tel7E01G755300, Tel7E01G755700, Tel7E01G755800, Tel7E01G756900, Tel7E01G936700
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG064410, gene_TRIDC2BG068680 ... gene_TRIDC5AG036170, gene_TRIDC6AG018020, gene_TRIDC6BG023910, gene_TRIDC7AG062200, gene_TRIDC7BG055550
Poaceae	Triticum aestivum	18	TraesCS2A02G451200.1, TraesCS2B02G472500.1 ... TraesCS2D02G450900.1, TraesCS5A02G226300.1, TraesCS5D02G233500.1, TraesCS6A02G133700.1, TraesCS6B02G162000.1, TraesCS6D02G123100.1, TraesCS7A02G448500.1, TraesCS7A02G448700.1, TraesCS7A02G538800.1, TraesCS7B02G348500.1, TraesCS7D02G438000.1, TraesCS7D02G438500.2, TraesCS7D02G525200.1, TraesCS7D02G525300.1, TraesCS7D02G525600.1, TraesCSU02G097700.1
Poaceae	Zea mays	3	Zm00001eb207690_P001, Zm00001eb232670_P001 ... Zm00001eb273550_P001
Poaceae	Zoysia japonica	5	nbis-gene-29923, nbis-gene-33700, nbis-gene-40602 ... nbis-gene-49302, nbis-gene-7975
Poaceae	Zoysia macrostachya	5	Zma_g12219, Zma_g14976, Zma_g15906, Zma_g21105, Zma_g33279
Portulacaceae	Portulaca oleracea	1	evm.TU.LG14.904
Posidoniaceae	Posidonia oceanica	1	gene.Posoc10g00740
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-3578
Tamaricaceae	Tamarix chinensis	2	TC07G2259, TC07G2260