HalophFGD

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Basic Information
Locus ID: Tel7E01G604000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Phloem protein 2
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 489270443 489272525 - Tel7E01G604000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.07 31,840.53 Da 46.98 76.94 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14299 Phloem protein 2 111 287 6.7E-34 IPR025886
SUPERFAMILY SSF81383 F-box domain 7 88 4.19E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 3 91 2.1E-5 -
ProSiteProfiles PS50181 F-box domain profile. 13 59 9.126548 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G02250.1 phloem protein 2-B2. 0
RefSeq XP_044440576.1 F-box protein PP2-B10-like [Triticum aestivum] 0
Swiss-Prot Q9ZVR5 Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2 0
TrEMBL A0A453SA69 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH01.1848, AH01.3671, BH01.4023, BH08.313, CH01.2257 ...
CH01.4294, CH08.390
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_8AG0617210, gene-QOZ80_8BG0644830
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.3HG0231520.1, HORVU.MOREX.r3.7HG0701150.1 ...
HORVU.MOREX.r3.7HG0714530.1
Poaceae Lolium multiflorum 2 gene-QYE76_032497, gene-QYE76_032531
Poaceae Oryza coarctata 2 Oco15G001980, Oco16G002040
Poaceae Oryza sativa 1 LOC_Os08g05480.1
Poaceae Paspalum vaginatum 3 gene-BS78_07G043700, gene-BS78_07G082500 ...
gene-BS78_07G082600
Poaceae Puccinellia tenuiflora 3 Pt_Chr0405591, Pt_Chr0405592, Pt_Chr0405593
Poaceae Sporobolus alterniflorus 7 Chr16G001100, Chr16G001190, Chr17G001130, Chr20G010660 ...
Chr20G010680, Chr29G011680, Chr29G011700
Poaceae Thinopyrum elongatum 3 Tel3E01G144300, Tel7E01G524700, Tel7E01G604000
Poaceae Triticum dicoccoides 5 gene_TRIDC3AG009440, gene_TRIDC3BG013290 ...
gene_TRIDC7AG042560, gene_TRIDC7AG051800, gene_TRIDC7BG033690
Poaceae Triticum aestivum 8 TraesCS3A02G079300.1, TraesCS3B02G094500.1 ...
TraesCS3D02G079700.1, TraesCS7A02G304800.1, TraesCS7A02G371000.1, TraesCS7B02G205100.1, TraesCS7D02G300300.1, TraesCS7D02G351500.1
Poaceae Zea mays 2 Zm00001eb046560_P001, Zm00001eb416330_P002
Poaceae Zoysia japonica 3 nbis-gene-41564, nbis-gene-41565, nbis-gene-41580
Poaceae Zoysia macrostachya 3 Zma_g23606, Zma_g23607, Zma_g23615
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.