halophFGD

Basic Information

Locus ID: Tel7E01G578600

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: Arabinogalactan peptide

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	469412712	469414428	-	Tel7E01G578600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.41	7,350.61 Da	41.51	130.14	1.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF06376	Arabinogalactan peptide	30	61	7.1E-18	IPR009424

Best hit

Source	Best Hit ID	Description
TAIR	AT2G46330.1	arabinogalactan protein 16. Encodes arabinogalactan protein (AGP16).
RefSeq	XP_037460445.1	arabinogalactan protein 20-like [Triticum dicoccoides]
Swiss-Prot	O82337	Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1
TrEMBL	A0A1D6BKF3	Arabinogalactan peptide 16-like OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg23532, jg4745
Aizoaceae	Mesembryanthemum crystallinum	1	gene_9066
Amaranthaceae	Atriplex hortensis	2	Ah014510, Ah018719
Amaranthaceae	Beta vulgaris	3	BVRB_3g052530, BVRB_8g196120, BVRB_8g196160
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg24942, Sbi_jg8801
Amaranthaceae	Salicornia europaea	1	Seu_jg19804
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00007834
Amaranthaceae	Suaeda glauca	2	Sgl42183, Sgl46952
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0004290, CQ.Regalona.r1.3BG0004440 ... CQ.Regalona.r1.8AG0020450, CQ.Regalona.r1.8BG0021990
Apiaceae	Apium graveolens	3	Ag10G02543, Ag5G01693, Ag8G00200
Arecaceae	Cocos nucifera	3	COCNU_03G015990, COCNU_14G000110, scaffold023725G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103702938, gene-LOC103709178, gene-LOC113462799
Asparagaceae	Asparagus officinalis	1	AsparagusV1_01.3181.V1.1
Asteraceae	Flaveria trinervia	5	Ftri15G32274, Ftri4G10105, Ftri7G01908, Ftri7G04948 ... Ftri8G07351
Brassicaceae	Arabidopsis thaliana	4	AT2G46330.1, AT3G61640.1, AT5G24105.1, AT5G53250.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10001752m.g.v1.0, Thhalv10015233m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp4g28370.v2.2, Sp5g01770.v2.2, Sp6g15410.v2.2
Brassicaceae	Brassica nigra	9	BniB02g031510.2N, BniB02g077040.2N, BniB04g003360.2N ... BniB05g032860.2N, BniB06g061900.2N, BniB07g040320.2N, BniB08g016790.2N, BniB08g030110.2N, BniS06172g130.2N
Casuarinaceae	Casuarina equisetifolia	6	Ceq02G1229, Ceq03G0204, Ceq06G1473, Ceq06G1477, Ceq06G1592 ... Ceq09G1556
Casuarinaceae	Casuarina glauca	4	Cgl02G1268, Cgl03G0251, Cgl06G1531, Cgl06G1657
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g12320, gene.Cymno06g02940, gene.Cymno12g01800
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate03g17640, gene.Thate03g24990, gene.Thate09g13690 ... gene.Thate09g15230
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.2844, evm.TU.LG04.751, evm.TU.LG10.1499
Plantaginaceae	Plantago ovata	2	Pov_00005318, Pov_00005424
Poaceae	Echinochloa crus-galli	13	AH02.2190, AH02.2583, AH05.610, AH06.1778, AH07.1146 ... BH02.2270, BH02.2686, BH05.662, BH06.1660, CH02.2423, CH02.3848, CH05.760, CH07.1006
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_1AG0027170, gene-QOZ80_1BG0077400 ... gene-QOZ80_2AG0108480, gene-QOZ80_5AG0401380, gene-QOZ80_5BG0449970, gene-QOZ80_6AG0530410, gene-QOZ80_6BG0484210
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0026190.1, HORVU.MOREX.r3.2HG0114790.1 ... HORVU.MOREX.r3.3HG0276880.1, HORVU.MOREX.r3.3HG0290200.1, HORVU.MOREX.r3.7HG0710400.1
Poaceae	Lolium multiflorum	3	gene-QYE76_010526, gene-QYE76_022406, gene-QYE76_034010
Poaceae	Oryza coarctata	10	Oco01G016190, Oco02G016440, Oco03G007190, Oco04G005640 ... Oco04G007530, Oco09G004710, Oco10G004060, Oco11G010010, Oco12G009970, Oco20G000970
Poaceae	Oryza sativa	5	LOC_Os01g46850.1, LOC_Os02g11880.1, LOC_Os02g16500.1 ... LOC_Os05g12580.1, LOC_Os10g06970.1
Poaceae	Paspalum vaginatum	6	gene-BS78_03G179600, gene-BS78_03G216900 ... gene-BS78_04G113600, gene-BS78_09G072000, gene-BS78_09G086900, gene-BS78_10G143400
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0205364, Pt_Chr0400100, Pt_Chr0501481, Pt_Chr0605005
Poaceae	Sporobolus alterniflorus	11	Chr02G016580, Chr03G010090, Chr03G012260, Chr06G030800 ... Chr08G012530, Chr10G013010, Chr11G009250, Chr15G022260, Chr18G004600, Chr21G011560, Chr22G012710
Poaceae	Thinopyrum elongatum	3	Tel1E01G210000, Tel3E01G408600, Tel7E01G578600
Poaceae	Triticum dicoccoides	5	gene_TRIDC1AG014360, gene_TRIDC1BG019680 ... gene_TRIDC3BG039970, gene_TRIDC7AG047980, gene_TRIDC7BG039480
Poaceae	Triticum aestivum	8	TraesCS1A02G113100.1, TraesCS1B02G133200.1 ... TraesCS1D02G114500.1, TraesCS3A02G238200.1, TraesCS3B02G266700.1, TraesCS7A02G343600.1, TraesCS7B02G239500.1, TraesCS7D02G336000.1
Poaceae	Zea mays	4	Zm00001eb203920_P002, Zm00001eb237880_P001 ... Zm00001eb350580_P001, Zm00001eb359480_P001
Poaceae	Zoysia japonica	5	nbis-gene-17953, nbis-gene-29038, nbis-gene-29632 ... nbis-gene-34158, nbis-gene-50941
Poaceae	Zoysia macrostachya	4	Zma_g10582, Zma_g12556, Zma_g15376, Zma_g27869
Portulacaceae	Portulaca oleracea	1	evm.TU.LG17.418
Posidoniaceae	Posidonia oceanica	3	gene.Posoc03g23050, gene.Posoc03g24290, gene.Posoc09g08540
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_16_RagTag.109, evm.TU.Scaffold_5_RagTag.587
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-10762, nbisL1-mrna-12759, nbisL1-mrna-13134 ... nbisL1-mrna-18281, nbisL1-mrna-22353, nbisL1-mrna-25600, nbisL1-mrna-29291
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-14820, nbisL1-mrna-15290, nbisL1-mrna-19434 ... nbisL1-mrna-20532, nbisL1-mrna-4392
Rhizophoraceae	Ceriops zippeliana	8	nbisL1-mrna-16797, nbisL1-mrna-16801, nbisL1-mrna-20374 ... nbisL1-mrna-2226, nbisL1-mrna-22475, nbisL1-mrna-4729, nbisL1-mrna-7380, nbisL1-mrna-8604
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000003l.223, evm.TU.utg000006l.439
Rhizophoraceae	Kandelia obovata	7	Maker00000938, Maker00001531, Maker00008610, Maker00013172 ... Maker00014374, Maker00014993, Maker00017709
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-10255, nbisL1-mrna-15985, nbisL1-mrna-1720 ... nbisL1-mrna-3567
Rhizophoraceae	Rhizophora mangle	8	nbisL1-mrna-10968, nbisL1-mrna-14777, nbisL1-mrna-19575 ... nbisL1-mrna-20516, nbisL1-mrna-21048, nbisL1-mrna-5461, nbisL1-mrna-6737, nbisL1-mrna-7234
Salicaceae	Populus euphratica	1	populus_peu34499
Solanaceae	Lycium barbarum	2	gene-LOC132638057, gene-LOC132645486
Solanaceae	Solanum chilense	4	SOLCI002064900, SOLCI002865600, SOLCI003906800 ... SOLCI005350900
Solanaceae	Solanum pennellii	1	gene-LOC114074443
Tamaricaceae	Reaumuria soongarica	5	gene_5248, gene_747, gene_748, gene_7998, gene_8953
Tamaricaceae	Tamarix chinensis	1	TC03G2141
Zosteraceae	Zostera marina	3	Zosma04g04540.v3.1, Zosma05g03440.v3.1, Zosma06g10470.v3.1