HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel7E01G543000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Protein kinase domain containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 438796937 438798031 - Tel7E01G543000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.02 39,879.48 Da 38.21 81.46 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 19 342 2.6E-43 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 15 345 1.23E-55 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 13 117 5.2E-11 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 118 350 7.5E-43 -
SMART SM00220 serkin_6 19 342 1.5E-53 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 19 342 34.930073 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 48 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 150 162 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K08818 (cell division cycle 2-like [EC:2.7.11.22])
Best hit
Source Best Hit ID Description E-value
TAIR AT1G20930.1 cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. 0
RefSeq XP_037460012.1 putative cyclin-dependent kinase F-2 [Triticum dicoccoides] 0
Swiss-Prot Q2QSL4 Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 0
TrEMBL A0A3B6RKE0 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 12 AH03.913, AH04.804, AH09.231, BH02.1842, BH03.1045, BH09.317 ...
BH03.1049, BH04.1232, BH04.1234, CH03.1199, CH04.1430, CH09.353
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5BG0434090, gene-QOZ80_9BG0704790
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.6HG0599010.1.CDS1 ...
HORVU.MOREX.r3.7HG0703920.1.CDS1, HORVU.MOREX.r3.7HG0703950.1.CDS1, HORVU.MOREX.r3.7HG0703960.1.CDS1, HORVU.MOREX.r3.7HG0703970.1.CDS1, HORVU.MOREX.r3.7HG0703980.1.CDS1, HORVU.MOREX.r3.7HG0704000.1
Poaceae Lolium multiflorum 18 gene-QYE76_002253, gene-QYE76_009803, gene-QYE76_009804 ...
gene-QYE76_009806, gene-QYE76_010042, gene-QYE76_010043, gene-QYE76_010044, gene-QYE76_010046, gene-QYE76_010047, gene-QYE76_010049, gene-QYE76_010050, gene-QYE76_010051, gene-QYE76_010052, gene-QYE76_010054, gene-QYE76_010055, gene-QYE76_010057, gene-QYE76_010058, gene-QYE76_010059
Poaceae Oryza sativa 1 LOC_Os12g23930.1
Poaceae Paspalum vaginatum 4 gene-BS78_05G275700, gene-BS78_06G292300, gene-BS78_K133000 ...
gene-BS78_07G231600
Poaceae Puccinellia tenuiflora 2 Pt_Chr0402801, Pt_Chr0501917
Poaceae Sporobolus alterniflorus 2 Chr09G008700, Chr13G016290
Poaceae Thinopyrum elongatum 2 Tel7E01G540700, Tel7E01G543000
Poaceae Triticum aestivum 12 TraesCS5B02G053600.1.cds1, TraesCS7A02G314600.1.cds1 ...
TraesCS7A02G314700.1.cds1, TraesCS7A02G315800.1.cds1, TraesCS7B02G215300.1.cds1, TraesCS7B02G215400.1.cds1, TraesCS7B02G216800.1.cds1, TraesCS7B02G216900.1.cds1, TraesCS7D02G311700.1.cds1, TraesCS7D02G311800.1.cds1, TraesCS7D02G311900.1.cds1, TraesCS7D02G312900.1.cds1
Poaceae Zea mays 7 Zm00001eb215100_P001, Zm00001eb349560_P001 ...
Zm00001eb349570_P001, Zm00001eb349580_P001, Zm00001eb349600_P001, Zm00001eb349610_P001, Zm00001eb377100_P001
Poaceae Zoysia japonica 7 nbis-gene-30271, nbis-gene-38569, nbis-gene-38570 ...
nbis-gene-43758, nbis-gene-49364, nbis-gene-54927, nbis-gene-59065
Poaceae Zoysia macrostachya 4 Zma_g18822, Zma_g25940, Zma_g31850, Zma_g4935
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.