HalophFGD

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Basic Information
Locus ID: Tel7E01G536000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 432281059 432282813 - Tel7E01G536000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.05 41,061.42 Da 47.05 82.08 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 16 155 1.19145E-20 IPR002083
CDD cd18280 BTB_POZ_BPM_plant 180 293 6.79392E-47 -
Pfam PF00651 BTB/POZ domain 185 294 3.6E-28 IPR000210
SUPERFAMILY SSF54695 POZ domain 170 293 9.42E-32 IPR011333
SUPERFAMILY SSF49599 TRAF domain-like 14 160 6.21E-24 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 14 158 2.2E-22 IPR008974
Gene3D G3DSA:1.25.40.420 - 296 365 5.5E-16 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 168 291 7.1E-38 IPR011333
SMART SM00225 BTB_4 192 297 1.2E-21 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 192 259 18.823666 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 15 154 15.302611 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G39760.1 BTB/POZ/MATH-domains containing protein. 0
RefSeq XP_044438734.1 BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] 0
Swiss-Prot O22286 BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 0
TrEMBL R7WG36 Speckle-type POZ protein-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.7HG0703150.1.CDS1 ...
HORVU.MOREX.r3.7HG0703170.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_033572, gene-QYE76_033573
Poaceae Oryza sativa 1 LOC_Os08g03470.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0402552
Poaceae Thinopyrum elongatum 2 Tel7E01G536000, Tel7E01G536100
Poaceae Triticum dicoccoides 2 gene_TRIDC7AG043430, gene_TRIDC7BG034710
Poaceae Triticum aestivum 5 TraesCS7A02G311400.1.cds1, TraesCS7B02G211100.1.cds1 ...
TraesCS7B02G211200.1.cds1, TraesCS7D02G307900.1.cds1, TraesCS7D02G308000.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.