Basic Information
Locus ID:
Tel7E01G532700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 425778080 | 425779983 | + | Tel7E01G532700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 52,892.82 Da | 43.12 | 83.55 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 318 | 446 | 2.59041E-34 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 331 | 434 | 1.3E-13 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 204 | 455 | 3.34E-31 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 311 | 476 | 4.6E-36 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 123 | 258 | 3.7E-16 | IPR027417 |
| SMART | SM00490 | helicmild6 | 358 | 437 | 1.9E-4 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 317 | 476 | 14.910719 | IPR001650 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.3 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_048548940.1 | eukaryotic initiation factor 4A-10-like [Triticum urartu] | 0 |
| Q0E2Q3 | Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0221300 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6NQJ5 | RNA helicase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology