Basic Information
Locus ID:
Tel7E01G510000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 399963953 | 399966321 | + | Tel7E01G510000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 31,015.63 Da | 38.91 | 94.44 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 72 | 152 | 2.56495E-53 | - |
| Pfam | PF00189 | Ribosomal protein S3, C-terminal domain | 163 | 245 | 1.2E-24 | IPR001351 |
| Pfam | PF07650 | KH domain | 77 | 150 | 1.1E-11 | IPR004044 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 67 | 156 | 1.47E-25 | IPR009019 |
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 150 | 248 | 5.75E-28 | IPR036419 |
| Gene3D | G3DSA:3.30.1140.32 | - | 150 | 276 | 8.4E-66 | IPR036419 |
| Gene3D | G3DSA:3.30.300.20 | - | 54 | 148 | 3.4E-48 | IPR015946 |
| TIGRFAM | TIGR01008 | uS3_euk_arch: ribosomal protein uS3 | 65 | 267 | 4.4E-71 | IPR005703 |
| ProSiteProfiles | PS50823 | Type-2 KH domain profile. | 78 | 149 | 11.016348 | IPR004044 |
| ProSitePatterns | PS00548 | Ribosomal protein S3 signature. | 204 | 240 | - | IPR018280 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_044430139.1 | 40S ribosomal protein S3-3 [Triticum aestivum] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | A0A453RVA5 | KH type-2 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology