Basic Information
Locus ID:
Tel7E01G489600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 347075857 | 347088104 | + | Tel7E01G489600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 109,515.30 Da | 55.03 | 69.60 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 463 | 765 | 5.06155E-130 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 462 | 764 | 9.4E-46 | IPR001394 |
| Pfam | PF01753 | MYND finger | 114 | 151 | 1.5E-9 | IPR002893 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 458 | 770 | 9.42E-86 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 111 | 153 | 2.09E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 455 | 779 | 7.2E-92 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 106 | 155 | 7.9E-12 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 462 | 767 | 51.533283 | IPR028889 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 114 | 151 | 11.576741 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 114 | 151 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 463 | 478 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 840 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 946 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 995 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 835 | 877 | - | - |
| Coils | Coil | Coil | 33 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_048543391.1 | ubiquitin carboxyl-terminal hydrolase 17-like [Triticum urartu] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7R3I1 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology