Basic Information
Locus ID:
Tel7E01G453800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 296322518 | 296327913 | - | Tel7E01G453800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 126,506.64 Da | 48.72 | 66.84 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 509 | 1134 | 3.4E-41 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 505 | 1136 | 2.94E-68 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 365 | 440 | 2.35E-6 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 877 | 1142 | 4.6E-34 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 495 | 702 | 2.5E-29 | - |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 151 | 229 | 11.088625 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 372 | 444 | 11.323589 | IPR001607 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 508 | 1137 | 35.153599 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 509 | 524 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 1074 | 1092 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 864 | 898 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 865 | 898 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 1004 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 999 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_048540649.1 | ubiquitin carboxyl-terminal hydrolase 16-like, partial [Triticum urartu] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RIB3 | Ubiquitinyl hydrolase 1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology