Basic Information
Locus ID:
Tel7E01G453600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 295833972 | 295834772 | - | Tel7E01G453600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 27,673.90 Da | 73.74 | 79.14 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 218 | 255 | 3.38128E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 216 | 261 | 1.1E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 217 | 262 | 2.65E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 266 | 4.5E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 218 | 255 | 1.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 218 | 256 | 11.751628 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 233 | 242 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 159 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_044437724.1 | pre-mRNA-splicing factor cwc24-like [Triticum aestivum] | 0 |
| TrEMBL | A0A453RMC6 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology