Basic Information
Locus ID:
Tel7E01G430500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 270572813 | 270577690 | + | Tel7E01G430500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 83,492.97 Da | 37.33 | 86.22 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 367 | 669 | 3.50764E-150 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 53 | 350 | 3.65512E-163 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 58 | 345 | 1.9E-9 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 372 | 665 | 1.3E-33 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 52 | 350 | 2.43E-49 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 366 | 669 | 1.81E-48 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 51 | 351 | 1.3E-41 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 365 | 670 | 3.6E-46 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 367 | 670 | 34.719177 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 53 | 351 | 33.964005 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_037460116.1 | glycerophosphodiester phosphodiesterase GDPDL4-like [Triticum dicoccoides] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RHT0 | glycerophosphodiester phosphodiesterase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology