Basic Information
Locus ID:
Tel7E01G385200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 227107029 | 227107814 | + | Tel7E01G385200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 28,608.11 Da | 44.17 | 78.43 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 32 | 160 | 8.61823E-32 | IPR002083 |
| Pfam | PF00917 | MATH domain | 41 | 160 | 4.6E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 249 | 2.6E-14 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 30 | 169 | 6.54E-38 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 250 | 3.14E-19 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 173 | 252 | 2.8E-22 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 164 | 8.4E-34 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 31 | 159 | 24.303076 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 197 | 249 | 12.267471 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_044442026.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SER4 | BTB/POZ and MATH domain-containing protein 1-like OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_065873, gene-QYE76_066018, gene-QYE76_066019 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G385200 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG026790 |