halophFGD

Basic Information

Locus ID: Tel7E01G337400

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: domain in TBC and LysM domain containing proteins

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	187938942	187943327	-	Tel7E01G337400

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.27	39,603.62 Da	47.11	80.19	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07534	TLD	201	338	1.3E-29	IPR006571
SMART	SM00584	109ultra	175	339	9.8E-33	IPR006571
ProSiteProfiles	PS51886	TLDc domain profile.	176	339	24.378651	IPR006571

Best hit

Source	Best Hit ID	Description
TAIR	AT4G39870.1	TLD-domain containing nucleolar protein.
RefSeq	XP_020160501.1	oxidation resistance protein 1 isoform X2 [Aegilops tauschii subsp. strangulata]
Swiss-Prot	Q9VIH7	GTPase-activating protein skywalker OS=Drosophila melanogaster OX=7227 GN=sky PE=1 SV=2
TrEMBL	A0A453R4X5	TLDc domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg1011, jg28747, jg39507
Aizoaceae	Mesembryanthemum crystallinum	2	gene_15932, gene_23714
Amaranthaceae	Atriplex hortensis	2	Ah019167, Ah027327
Amaranthaceae	Beta vulgaris	2	BVRB_3g048270, BVRB_6g135150
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12708, Sbi_jg37944, Sbi_jg52050, Sbi_jg53198 ... Sbi_jg6083
Amaranthaceae	Salicornia europaea	2	Seu_jg28231, Seu_jg8697
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00006164, GOSA_00010316
Amaranthaceae	Suaeda glauca	12	Sgl00904, Sgl05445, Sgl05858, Sgl05982, Sgl21888, Sgl27168 ... Sgl33555, Sgl39208, Sgl43260, Sgl48088, Sgl77998, Sgl80503
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000000880, gene:ENSEOMG00000001473 ... gene:ENSEOMG00000003278, gene:ENSEOMG00000015440, gene:ENSEOMG00000018929, gene:ENSEOMG00000024407, gene:ENSEOMG00000032529, gene:ENSEOMG00000044360
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.3BG0000980, CQ.Regalona.r1.6AG0024220 ... CQ.Regalona.r1.6BG0025560
Anacardiaceae	Pistacia vera	2	pistato.v30196530, pistato.v30239770
Apiaceae	Apium graveolens	5	Ag4G01482, Ag4G02487, Ag5G02181, Ag5G02617, Ag8G01452
Arecaceae	Cocos nucifera	3	COCNU_05G005940, COCNU_07G001310, COCNU_10G000970
Arecaceae	Phoenix dactylifera	5	gene-LOC103703894, gene-LOC103711327, gene-LOC103715422 ... gene-LOC120103700, gene-LOC120108983
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.199.V1.1, AsparagusV1_08.2187.V1.1
Asteraceae	Flaveria trinervia	2	Ftri12G18805, Ftri17G05096
Brassicaceae	Arabidopsis thaliana	2	AT2G05590.2, AT4G39870.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10002628m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g24070.v2.2, Sp7g36020.v2.2
Brassicaceae	Brassica nigra	4	BniB01g032880.2N, BniB02g010820.2N, BniB02g089000.2N ... BniB05g000180.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G1745, Ceq07G1251
Casuarinaceae	Casuarina glauca	2	Cgl06G1810, Cgl07G1327
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno09g04760, gene.Cymno10g00690, gene.Cymno11g06780
Dunaliellaceae	Dunaliella salina	1	Dusal.0738s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate05g28180, gene.Thate08g00520, gene.Thate08g24240
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-10164, nbisL1-mrna-5050, nbisL1-mrna-6728
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.662, evm.TU.LG11.740
Plantaginaceae	Plantago ovata	1	Pov_00020966
Plumbaginaceae	Limonium bicolor	5	Lb1G05910, Lb2G11752, Lb5G27297, Lb5G27816, Lb7G32933
Poaceae	Echinochloa crus-galli	9	AH03.955, AH06.849, AH07.3523, BH03.1113, BH06.891, CH06.929 ... BH07.3340, CH03.1258, CH07.3403
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0146180, gene-QOZ80_2BG0201690 ... gene-QOZ80_6AG0514290, gene-QOZ80_6BG0465990, gene-QOZ80_7AG0565040
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.6HG0613660.2, HORVU.MOREX.r3.7HG0665270.1
Poaceae	Lolium multiflorum	4	gene-QYE76_025452, gene-QYE76_028615, gene-QYE76_028781 ... gene-QYE76_041691
Poaceae	Oryza coarctata	5	Oco03G021950, Oco04G022580, Oco11G005520, Oco13G006150 ... Oco14G006760
Poaceae	Oryza sativa	3	LOC_Os02g51770.1, LOC_Os06g11790.1, LOC_Os07g25700.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G088800, gene-BS78_04G282800 ... gene-BS78_10G092400
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0203249, Pt_Chr0304032, Pt_Chr0404831, Pt_Chr0405886
Poaceae	Sporobolus alterniflorus	7	Chr09G019730, Chr0G034040, Chr11G019860, Chr13G003890 ... Chr21G003430, Chr24G006060, Chr28G005430
Poaceae	Thinopyrum elongatum	3	Tel2E01G434700, Tel6E01G541400, Tel7E01G337400
Poaceae	Triticum dicoccoides	3	gene_TRIDC6AG045400, gene_TRIDC6BG053030 ... gene_TRIDC7BG012760
Poaceae	Triticum aestivum	6	TraesCS6A02G300200.1, TraesCS6B02G329900.1 ... TraesCS6D02G280100.1, TraesCS7A02G180000.1, TraesCS7B02G085200.1, TraesCS7D02G181500.1
Poaceae	Zea mays	3	Zm00001eb194150_P003, Zm00001eb306200_P001 ... Zm00001eb372700_P001
Poaceae	Zoysia japonica	6	nbis-gene-1141, nbis-gene-21791, nbis-gene-21792 ... nbis-gene-51444, nbis-gene-57388, nbis-gene-8663
Poaceae	Zoysia macrostachya	4	Zma_g14458, Zma_g17173, Zma_g29363, Zma_g6381
Portulacaceae	Portulaca oleracea	5	evm.TU.LG04.2545, evm.TU.LG05.649, evm.TU.LG08.152 ... evm.TU.LG11.1382, evm.TU.LG25.670
Posidoniaceae	Posidonia oceanica	2	gene.Posoc04g15380, gene.Posoc06g01660
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_6_RagTag.1655
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-1625, nbisL1-mrna-17511
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15161, nbisL1-mrna-16148
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-12109, nbisL1-mrna-2563, nbisL1-mrna-2564
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000011l.1006, evm.TU.utg000019l.451
Rhizophoraceae	Kandelia obovata	2	Maker00002277, Maker00008303
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-15118, nbisL1-mrna-6255
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-2003, nbisL1-mrna-4417
Salicaceae	Populus euphratica	3	populus_peu13775, populus_peu21599, populus_peu22930
Solanaceae	Lycium barbarum	3	gene-LOC132604336, gene-LOC132609872, gene-LOC132614112
Solanaceae	Solanum chilense	3	SOLCI001763600, SOLCI004776200, SOLCI006618200
Solanaceae	Solanum pennellii	3	gene-LOC107005874, gene-LOC107018026, gene-LOC107031324
Tamaricaceae	Reaumuria soongarica	2	gene_12584, gene_3521
Tamaricaceae	Tamarix chinensis	2	TC05G1460, TC11G0811
Zosteraceae	Zostera marina	2	Zosma01g38320.v3.1, Zosma03g33940.v3.1