Basic Information
Locus ID:
Tel7E01G266000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 141936422 | 141942408 | + | Tel7E01G266000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 67,542.88 Da | 37.75 | 102.25 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 60 | 1.1E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 147 | 2.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 284 | 557 | 1.5E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 260 | 559 | 2.29E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 190 | 7.94E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 201 | 2.0E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 578 | 2.3E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 250 | 359 | 1.5E-32 | - |
| SMART | SM00220 | serkin_6 | 281 | 562 | 6.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 281 | 561 | 33.940693 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 287 | 311 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 406 | 418 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10290.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_044437220.1 | LRR receptor kinase SERK2-like [Triticum aestivum] | 0 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453QVQ9 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.1914, BH04.1940, CH04.2286 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0688640, gene-QOZ80_9BG0716520 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0656900.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066033 |
| Poaceae | Oryza coarctata | 2 | Oco21G008360, Oco22G009610 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g39370.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_05G204100, gene-BS78_05G204800, gene-BS78_K079100 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107637 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr16G004840, Chr17G004310, Chr31G007680 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G266000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG016000, gene_TRIDC7BG005350 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G134700.2, TraesCS7B02G036100.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb167150_P002 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18174 |