HalophFGD

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Basic Information
Locus ID: Tel7E01G261400
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Speckle-type POZ protein-like protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 139597461 139597724 - Tel7E01G261400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.68 9,635.96 Da 30.07 91.93 0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00651 BTB/POZ domain 8 79 2.5E-18 IPR000210
SUPERFAMILY SSF54695 POZ domain 3 79 7.26E-23 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 1 88 2.2E-26 IPR011333
SMART SM00225 BTB_4 15 86 0.0019 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 15 78 17.045013 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.5 - 0
RefSeq XP_044428019.1 BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A453QU37 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Brassicaceae Brassica nigra 1 BniB01g059720.2N
Poaceae Thinopyrum elongatum 3 Tel2E01G981800, Tel4E01G649400, Tel7E01G261400
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.