Basic Information
Locus ID:
Tel7E01G199600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RNA recognition motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 107313885 | 107317244 | - | Tel7E01G199600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 29,507.23 Da | 66.78 | 77.01 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12420 | RRM_RBPMS_like | 168 | 238 | 2.7498E-30 | - |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 170 | 242 | 7.8E-11 | IPR000504 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 160 | 259 | 5.91E-13 | IPR035979 |
| Gene3D | G3DSA:3.30.70.330 | - | 163 | 254 | 2.4E-18 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 169 | 250 | 2.5E-6 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 168 | 254 | 12.082784 | IPR000504 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76940.2 | RNA-binding (RRM/RBD/RNP motifs) family protein. | 0 |
| RefSeq | XP_037423253.1 | RNA-binding protein 2-like [Triticum dicoccoides] | 0 |
| A1A6K6 | Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I0X6 | RRM domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology