Basic Information
Locus ID:
Tel7E01G149800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ribosomal protein S20
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 77426866 | 77428686 | - | Tel7E01G149800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 14,105.27 Da | 34.22 | 86.53 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 29 | 123 | 4.0E-29 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 27 | 124 | 1.15E-30 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 15 | 126 | 2.4E-48 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 29 | 123 | 1.5E-39 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 26 | 124 | 1.6E-40 | IPR005729 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 62 | 77 | 2.6E-13 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 84 | 98 | 2.6E-13 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 27 | 40 | 2.6E-13 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 25 | 124 | 18.834848 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45030.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_037479531.1 | 40S ribosomal protein S20 [Triticum dicoccoides] | 0 |
| P35686 | Small ribosomal subunit protein uS10 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2 | 0 | |
| TrEMBL | U5HTD8 | Ribosomal protein S20 OS=Triticum aestivum OX=4565 GN=rps20 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology