Basic Information
Locus ID:
Tel7E01G132400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 66347708 | 66358453 | + | Tel7E01G132400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 135,777.38 Da | 45.38 | 73.87 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07887 | Calmodulin binding protein-like | 655 | 804 | 3.6E-37 | IPR012416 |
| Pfam | PF07887 | Calmodulin binding protein-like | 139 | 287 | 4.4E-21 | IPR012416 |
| Pfam | PF00069 | Protein kinase domain | 855 | 1114 | 1.2E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 835 | 1119 | 1.48E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 932 | 1137 | 5.7E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 825 | 931 | 2.6E-24 | - |
| SMART | SM00220 | serkin_6 | 854 | 1117 | 1.6E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 854 | 1131 | 35.707443 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 972 | 984 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 860 | 883 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1142 | 1173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1151 | 1173 | - | - |
| Coils | Coil | Coil | 59 | 90 | - | - |
| Coils | Coil | Coil | 95 | 115 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044351297.1 | uncharacterized protein LOC123071779 isoform X1 [Triticum aestivum] | 0 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Y4P4 | Dof-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2165, CH04.2588, CH06.2103 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0306700.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_058377, gene-QYE76_058984, gene-QYE76_058985 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G255700, gene-BS78_05G255800 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G641200, Tel3E01G641300, Tel3E01G896700 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3BG086480, gene_TRIDC3BG086490 |
| Poaceae | Triticum aestivum | 5 | TraesCS3A02G403500.1, TraesCS3B02G600600.1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-45984, nbis-gene-45985 |