Basic Information
Locus ID:
Tel7E01G130600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 65463793 | 65470675 | + | Tel7E01G130600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 43,014.61 Da | 43.73 | 82.91 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 63 | 163 | 2.4E-17 | IPR020683 |
| Pfam | PF00023 | Ankyrin repeat | 179 | 209 | 3.0E-5 | IPR002110 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 14 | 231 | 3.84E-35 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 274 | 334 | 1.45E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 271 | 345 | 2.3E-8 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 123 | 237 | 1.7E-21 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 8 | 122 | 7.2E-19 | IPR036770 |
| SMART | SM00248 | ANK_2a | 134 | 163 | 8.9E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 58 | 87 | 9.5 | IPR002110 |
| SMART | SM00184 | ring_2 | 281 | 329 | 0.0091 | IPR001841 |
| SMART | SM00248 | ANK_2a | 178 | 207 | 0.01 | IPR002110 |
| SMART | SM00248 | ANK_2a | 92 | 121 | 0.58 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 92 | 117 | 9.409914 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 281 | 330 | 10.025527 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 134 | 163 | 10.603827 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 178 | 210 | 11.54089 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 92 | 117 | 9.430799 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 134 | 166 | 11.48747 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 178 | 204 | 11.187517 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 296 | 305 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 135 | 150 | 9.7E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 194 | 208 | 9.7E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 391 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_037423533.1 | probable E3 ubiquitin-protein ligase XBOS36 [Triticum dicoccoides] | 0 |
| Q4JHE0 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6TCN8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology