Basic Information
Locus ID:
Tel7E01G1027900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
PHD zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 742729126 | 742735076 | - | Tel7E01G1027900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 112,329.11 Da | 61.05 | 68.43 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00628 | PHD-finger | 662 | 703 | 8.5E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 595 | 644 | 5.5E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 369 | 424 | 2.6E-17 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 904 | 988 | 4.87E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 648 | 706 | 5.76E-16 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 750 | 803 | 4.53E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 749 | 808 | 1.9E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 647 | 724 | 2.5E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 661 | 702 | 2.1E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 749 | 805 | 4.0E-4 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 659 | 704 | 10.6292 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 662 | 701 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1023 | 1044 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1016 | 1050 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 537 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 47 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_048539453.1 | uncharacterized protein LOC125518672 [Triticum urartu] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6TTM1 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology