Basic Information
Locus ID:
Tel7E01G1006300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 731448978 | 731460837 | + | Tel7E01G1006300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 144,049.36 Da | 42.56 | 91.86 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 471 | 724 | 4.48259E-38 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 295 | 7.6E-48 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 586 | 624 | 0.12 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 673 | 709 | 0.01 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1102 | 1140 | 5.5E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 630 | 667 | 1.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1145 | 1181 | 0.015 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 557 | 1021 | 2.14E-44 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 324 | 425 | 3.92E-8 | IPR008962 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 468 | 592 | 5.18E-13 | IPR011047 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 939 | 1231 | 1.59E-41 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 796 | 927 | 3.66E-9 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 301 | 2.02E-68 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 793 | 927 | 5.8E-17 | IPR013783 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 315 | 445 | 7.5E-14 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 937 | 1224 | 5.7E-56 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 111 | 7.9E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 311 | 1.1E-47 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 465 | 727 | 1.6E-66 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1058 | 1096 | 9.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1143 | 1181 | 7.6E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 585 | 624 | 0.0067 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1099 | 1140 | 5.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 930 | 968 | 2.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 670 | 709 | 1.6E-5 | IPR001680 |
| SMART | SM00220 | serkin_6 | 38 | 302 | 2.9E-37 | IPR000719 |
| SMART | SM00320 | WD40_4 | 498 | 537 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 626 | 667 | 7.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 457 | 495 | 9.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 546 | 581 | 78.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 971 | 1010 | 1.3 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 797 | 924 | 10.472175 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1106 | 1142 | 9.520146 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 633 | 676 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 307 | 442 | 10.778167 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 677 | 709 | 9.230148 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 302 | 37.078442 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 633 | 670 | 10.337415 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 677 | 709 | 11.009724 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1106 | 1149 | 12.045688 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1127 | 1141 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 654 | 668 | - | IPR019775 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 66 | - | IPR017441 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 654 | 668 | 5.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 696 | 710 | 5.3E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1127 | 1141 | 5.3E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1235 | 1260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1235 | 1271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23270.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044425388.1 | uncharacterized protein LOC123149743 isoform X2 [Triticum aestivum] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RP24 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_026662 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G1006300, Tel7E01G950300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC4AG068980, gene_TRIDC6BG007330 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS7A02G544600.1, TraesCS7A02G564900.2 ... |