HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel7E01G1000300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: WD domain, G-beta repeat
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 727673250 727677175 + Tel7E01G1000300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.92 50,289.01 Da 48.54 91.52 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 36 282 5.0E-42 IPR000719
Pfam PF00635 MSP (Major sperm protein) domain 303 378 2.3E-6 IPR000535
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 18 283 2.83E-63 IPR011009
SUPERFAMILY SSF49354 PapD-like 289 423 1.67E-9 IPR008962
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 3 108 7.1E-26 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 126 293 2.6E-39 -
Gene3D G3DSA:2.60.40.10 Immunoglobulins 294 422 6.0E-15 IPR013783
SMART SM00220 serkin_6 34 280 1.1E-29 IPR000719
ProSiteProfiles PS50202 Major sperm protein (MSP) domain profile. 284 419 9.903902 IPR000535
ProSiteProfiles PS50011 Protein kinase domain profile. 34 280 31.580315 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 40 63 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G23150.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 7. Encodes a cysteine-rich receptor-like protein kinase. 0
RefSeq XP_037454907.1 uncharacterized protein LOC119325270 isoform X1 [Triticum dicoccoides] 0
Swiss-Prot Q8L7G3 Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=2 SV=1 0
TrEMBL A0A453TDU3 Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_8946
Poaceae Echinochloa crus-galli 4 AH04.335, BH09.40, BH09.44, CH04.732
Poaceae Eleusine coracana subsp. coracana 12 gene-QOZ80_3AG0209300, gene-QOZ80_3AG0223370 ...
gene-QOZ80_3AG0249080, gene-QOZ80_3BG0268200, gene-QOZ80_5AG0397350, gene-QOZ80_5AG0397390, gene-QOZ80_5BG0445960, gene-QOZ80_6AG0515650, gene-QOZ80_9AG0675330, gene-QOZ80_9AG0675410, gene-QOZ80_9AG0676360, gene-QOZ80_9AG0677290
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.2HG0096370.1, HORVU.MOREX.r3.2HG0097540.1 ...
HORVU.MOREX.r3.2HG0109310.1, HORVU.MOREX.r3.2HG0217220.1, HORVU.MOREX.r3.3HG0327020.1, HORVU.MOREX.r3.6HG0565330.1, HORVU.MOREX.r3.7HG0653590.1, HORVU.MOREX.r3.7HG0748830.1, HORVU.MOREX.r3.7HG0752190.1
Poaceae Lolium multiflorum 6 gene-QYE76_018818, gene-QYE76_026354, gene-QYE76_026661 ...
gene-QYE76_030606, gene-QYE76_036501, gene-QYE76_036922
Poaceae Paspalum vaginatum 6 gene-BS78_05G057900, gene-BS78_05G058200, gene-BS78_K052100 ...
gene-BS78_05G069800, gene-BS78_05G125300, gene-BS78_K198400
Poaceae Puccinellia tenuiflora 8 Pt_Chr0401758, Pt_Chr0401772, Pt_Chr0401797, Pt_Chr0405727 ...
Pt_Chr0405728, Pt_Chr0604809, Pt_Chr0702453, Pt_Chr0702462
Poaceae Sporobolus alterniflorus 2 Chr17G009980, Chr18G011970
Poaceae Thinopyrum elongatum 14 Tel1E01G010400, Tel2E01G014500, Tel2E01G039500 ...
Tel2E01G1033700, Tel2E01G1042900, Tel2E01G804100, Tel3E01G879600, Tel5E01G777400, Tel6E01G095200, Tel7E01G093300, Tel7E01G1000300, Tel7E01G1011400, Tel7E01G1011700, Tel7E01G950200
Poaceae Triticum dicoccoides 25 gene_TRIDC1BG000340, gene_TRIDC1BG072680 ...
gene_TRIDC2AG010560, gene_TRIDC2AG081930, gene_TRIDC2AG082000, gene_TRIDC2BG004670, gene_TRIDC2BG090980, gene_TRIDC2BG091120, gene_TRIDC2BG091130, gene_TRIDC2BG091170, gene_TRIDC3AG062890, gene_TRIDC3AG070310, gene_TRIDC3AG073980, gene_TRIDC3BG070520, gene_TRIDC3BG070530, gene_TRIDC3BG079530, gene_TRIDC4AG072500, gene_TRIDC5AG066090, gene_TRIDC5BG071090, gene_TRIDC6AG004410, gene_TRIDC6BG006140, gene_TRIDC6BG069750, gene_TRIDC7BG076670, gene_TRIDC7BG076920, gene_TRIDC7BG077100
Poaceae Triticum aestivum 59 TraesCS1A02G002900.1, TraesCS1A02G003900.1 ...
TraesCS1B02G468000.1, TraesCS1B02G468800.2, TraesCS1D02G200400.1, TraesCS2A02G092000.1, TraesCS2A02G558500.1, TraesCS2A02G559000.1, TraesCS2B02G002200.1, TraesCS2B02G051500.2, TraesCS2B02G621800.2, TraesCS2B02G621900.1, TraesCS2D02G380700.1, TraesCS2D02G576600.1, TraesCS3A02G444500.1, TraesCS3A02G491400.1, TraesCS3A02G523400.1, TraesCS3B02G012700.1, TraesCS3B02G478400.1, TraesCS3B02G478700.1, TraesCS3B02G478900.1, TraesCS3B02G479100.1, TraesCS3B02G570600.1, TraesCS3D02G436900.2, TraesCS3D02G437100.2, TraesCS3D02G526900.1, TraesCS4A02G026100.1, TraesCS4A02G224400.1, TraesCS4A02G347500.1, TraesCS4A02G389500.1, TraesCS4A02G444100.1, TraesCS4D02G089300.1, TraesCS4D02G310900.1, TraesCS5A02G461000.2, TraesCS5B02G470900.1, TraesCS5B02G494000.1, TraesCS5B02G529200.1, TraesCS5D02G007100.1, TraesCS5D02G473200.2, TraesCS5D02G525000.1, TraesCS5D02G537000.1, TraesCS6A02G036500.1, TraesCS6A02G414700.1, TraesCS6A02G414900.1, TraesCS6B02G006000.2, TraesCS6B02G057700.1, TraesCS6B02G442900.1, TraesCS6D02G007800.1, TraesCS6D02G041900.1, TraesCS6D02G124000.1, TraesCS7B02G462900.3, TraesCS7B02G496300.2, TraesCS7B02G496700.1, TraesCS7B02G498000.1, TraesCS7D02G039300.1, TraesCS7D02G085400.1, TraesCSU02G099300.1, TraesCSU02G171300.1, TraesCSU02G207100.1
Poaceae Zea mays 4 Zm00001eb092260_P001, Zm00001eb195320_P001 ...
Zm00001eb238870_P001, Zm00001eb266200_P001
Poaceae Zoysia macrostachya 3 Zma_g17531, Zma_g17599, Zma_g17696
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.