Basic Information
Locus ID:
Tel7E01G055100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 26465034 | 26468313 | + | Tel7E01G055100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 65,352.78 Da | 42.75 | 83.91 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 317 | 504 | 6.0E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 558 | 1.48E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 312 | 3.4E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 313 | 351 | 2.6E-8 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 90 | 168 | 9.6E-9 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 352 | 583 | 2.1E-48 | - |
| SMART | SM00220 | serkin_6 | 294 | 557 | 6.3E-12 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 60 | 168 | 9.54589 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 557 | 29.912504 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 407 | 419 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 199 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_024316846.1 | putative receptor-like protein kinase At4g00960 [Brachypodium distachyon] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CUI9 | Protein kinase domain-containing protein (Fragment) OS=Brachypodium distachyon OX=15368 GN=BRADI_3g00942v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |