Basic Information
Locus ID:
Tel7E01G024400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 13149194 | 13154985 | - | Tel7E01G024400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 87,128.93 Da | 33.08 | 85.76 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 451 | 476 | 0.029 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 551 | 586 | 0.0048 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 434 | 747 | 8.96E-40 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 446 | 765 | 7.4E-55 | IPR015943 |
| Gene3D | G3DSA:1.20.930.20 | - | 3 | 117 | 5.0E-16 | IPR036537 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 300 | 421 | 1.4E-5 | IPR013783 |
| SMART | SM00320 | WD40_4 | 435 | 476 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 595 | 635 | 29.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 507 | 540 | 4.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 545 | 586 | 0.0042 | IPR001680 |
| SMART | SM00320 | WD40_4 | 681 | 720 | 0.0026 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 214 | - | - |
| Coils | Coil | Coil | 779 | 783 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044430739.1 | uncharacterized protein LOC123156654 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6ST33 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_05G233100, gene-BS78_05G233200 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G024400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG071590, gene_TRIDC4AG071760 |
| Poaceae | Triticum aestivum | 4 | TraesCS2D02G464300.1, TraesCS4A02G475000.1 ... |