Basic Information
Locus ID:
Tel7E01G023300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 12639592 | 12647710 | - | Tel7E01G023300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 204,693.80 Da | 42.68 | 98.06 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 16 | 138 | 1.5706E-17 | IPR038005 |
| Pfam | PF18052 | Rx N-terminal domain | 912 | 990 | 3.5E-9 | IPR041118 |
| Pfam | PF18052 | Rx N-terminal domain | 7 | 93 | 9.0E-18 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 1086 | 1292 | 7.0E-41 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 180 | 289 | 6.3E-10 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 161 | 289 | 2.35E-16 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1077 | 1336 | 2.39E-56 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1402 | 1763 | 4.93E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 317 | 574 | 3.74E-23 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 6 | 123 | 3.4E-30 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 1068 | 1229 | 2.2E-33 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 911 | 1030 | 2.0E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 305 | 657 | 8.5E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 1317 | 1415 | 6.9E-11 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1446 | 1787 | 3.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 163 | 304 | 1.0E-15 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 1527 | 1543 | 4.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1104 | 1119 | 4.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1273 | 1287 | 4.4E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1176 | 1190 | 4.4E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1000 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1007 | 1024 | - | - |
| Coils | Coil | Coil | 940 | 960 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044424620.1 | uncharacterized protein LOC123149154 [Triticum aestivum] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6R6H1 | NB-ARC domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH02.2484 |
| Poaceae | Hordeum vulgare | 8 | HORVU.MOREX.r3.5HG0534540.1, HORVU.MOREX.r3.6HG0550480.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_006977, gene-QYE76_048723, gene-QYE76_048728 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g22484.1 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205164, Pt_Chr0205206 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G1030200, Tel7E01G023300, Tel7E01G062300 |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC4AG067680, gene_TRIDC4AG068620 ... |
| Poaceae | Triticum aestivum | 22 | TraesCS1D02G381400.1, TraesCS2D02G511600.2 ... |