Basic Information
Locus ID:
Tel7E01G011300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 7244137 | 7250451 | - | Tel7E01G011300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 124,165.53 Da | 56.77 | 81.99 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 741 | 790 | 2.7E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 560 | 615 | 1.1E-13 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1054 | 1144 | 2.85E-6 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 790 | 851 | 6.17E-14 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 888 | 948 | 2.47E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 892 | 953 | 5.6E-13 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 794 | 882 | 2.0E-14 | IPR013083 |
| SMART | SM00249 | PHD_3 | 807 | 848 | 9.3E-9 | IPR001965 |
| SMART | SM00249 | PHD_3 | 894 | 951 | 0.014 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 805 | 850 | 9.2408 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 808 | 847 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 508 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_048545442.1 | uncharacterized protein LOC125524430 [Triticum urartu] | 0 |
| TrEMBL | A0A3B6I5K2 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology