Basic Information
Locus ID:
Tel7E01G005700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cytosine-specific methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 4008200 | 4013097 | - | Tel7E01G005700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 84,698.11 Da | 40.49 | 75.75 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 112 | 218 | 3.1E-10 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 385 | 700 | 5.3E-32 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 244 | 700 | 3.88E-72 | IPR029063 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 320 | 384 | 7.74E-5 | IPR016197 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 586 | 693 | 2.0E-25 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 50 | 204 | 1.8E-36 | IPR043151 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 205 | 546 | 2.1E-116 | - |
| SMART | SM00439 | BAH_4 | 104 | 219 | 5.2E-11 | IPR001025 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 389 | 697 | 5.1E-30 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 96 | 219 | 16.999451 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 245 | 707 | 44.332447 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 480 | 493 | 2.1E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 246 | 262 | 2.1E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 434 | 448 | 2.1E-12 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 757 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_037419474.1 | DNA (cytosine-5)-methyltransferase CMT3-like [Triticum dicoccoides] | 0 |
| C0SQ89 | DNA (cytosine-5)-methyltransferase CMT3 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT3 PE=2 SV=1 | 0 | |
| TrEMBL | R7W625 | Cytosine-specific methyltransferase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology