Basic Information
Locus ID:
Tel7E01G004700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cytosine-specific methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 3389821 | 3395087 | - | Tel7E01G004700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 83,151.22 Da | 31.24 | 85.40 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01426 | BAH domain | 33 | 137 | 1.6E-8 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 336 | 687 | 1.7E-32 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 171 | 687 | 8.75E-72 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 479 | 653 | 6.3E-214 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 174 | 706 | 6.3E-214 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 21 | 124 | 4.1E-27 | IPR043151 |
| SMART | SM00439 | BAH_4 | 1 | 139 | 5.1E-14 | IPR001025 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 339 | 684 | 3.1E-30 | IPR001525 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 172 | 694 | 42.781448 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 16 | 139 | 16.158825 | IPR001025 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 385 | 399 | 7.3E-13 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 173 | 189 | 7.3E-13 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 431 | 444 | 7.3E-13 | IPR001525 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69770.1 | chromomethylase 3. Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. | 0 |
| RefSeq | XP_037419474.1 | DNA (cytosine-5)-methyltransferase CMT3-like [Triticum dicoccoides] | 0 |
| Q9AXT8 | DNA (cytosine-5)-methyltransferase 1 OS=Zea mays OX=4577 GN=MET2A PE=1 SV=1 | 0 | |
| TrEMBL | R7W625 | Cytosine-specific methyltransferase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology