Basic Information
Locus ID:
Tel7E01G003400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 2720641 | 2723043 | - | Tel7E01G003400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 48,509.80 Da | 49.19 | 93.08 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 32 | 253 | 2.4E-48 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 335 | 411 | 1.8E-7 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 302 | 5.88E-67 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 322 | 417 | 2.88E-11 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 323 | 425 | 2.1E-14 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 322 | 1.1E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 104 | 1.6E-24 | - |
| SMART | SM00220 | serkin_6 | 32 | 403 | 8.1E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 326 | 35.071415 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 312 | 425 | 12.548552 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 38 | 60 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044441364.1 | disease resistance protein RGA5-like [Triticum aestivum] | 0 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I4W9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401763 |
| Poaceae | Thinopyrum elongatum | 3 | Tel3E01G887300, Tel7E01G003400, Tel7E01G032900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2BG011520, gene_TRIDC6AG000550 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G100300.1, TraesCS4A02G476000.1 ... |