Basic Information
Locus ID:
Tel6E01G792300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 582828287 | 582829519 | - | Tel6E01G792300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 44,918.25 Da | 36.73 | 76.37 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 163 | 8.24057E-28 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 193 | 268 | 2.3E-20 | IPR000210 |
| Pfam | PF00917 | MATH domain | 46 | 163 | 4.4E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 168 | 6.05E-29 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 187 | 338 | 1.92E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 340 | 410 | 1.3E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 185 | 333 | 2.3E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 168 | 8.2E-27 | IPR008974 |
| SMART | SM00225 | BTB_4 | 203 | 341 | 4.5E-16 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 264 | 16.548645 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 29 | 163 | 17.808422 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_037464624.1 | BTB/POZ and MATH domain-containing protein 3-like [Triticum dicoccoides] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JMZ5 | Speckle-type POZ protein-like protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.1925 |
| Poaceae | Hordeum vulgare | 7 | HORVU.MOREX.r3.1HG0084480.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 17 | gene-QYE76_018116, gene-QYE76_018795, gene-QYE76_018798 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29410.1 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0108068, Pt_Chr0202979, Pt_Chr0203631, Pt_Chr0206738 ... |
| Poaceae | Thinopyrum elongatum | 15 | Tel1E01G617200, Tel1E01G617400, Tel3E01G612800 ... |
| Poaceae | Triticum dicoccoides | 14 | gene_TRIDC1AG055610, gene_TRIDC1AG055620 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G378700.1.cds1, TraesCS1A02G378800.1.cds1 ... |