Basic Information
Locus ID:
Tel6E01G762800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 571749087 | 571755384 | + | Tel6E01G762800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 61,827.53 Da | 38.69 | 92.60 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 286 | 547 | 2.29374E-86 | - |
| CDD | cd00054 | EGF_CA | 164 | 207 | 2.16555E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 50 | 81 | 1.9E-7 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 282 | 544 | 1.0E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 550 | 8.34E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 355 | 558 | 1.1E-50 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 116 | 214 | 4.5E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 259 | 354 | 5.2E-22 | - |
| SMART | SM00181 | egf_5 | 167 | 214 | 0.0012 | IPR000742 |
| SMART | SM00179 | egfca_6 | 164 | 214 | 7.2E-10 | IPR001881 |
| SMART | SM00181 | egf_5 | 118 | 163 | 84.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 280 | 545 | 2.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 545 | 33.926559 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 189 | 200 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 399 | 411 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 164 | 198 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 286 | 308 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037454070.1 | wall-associated receptor kinase 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7QYH5 | Wall-associated receptor kinase 2 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology