Basic Information
Locus ID:
Tel6E01G761400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 571369501 | 571385874 | + | Tel6E01G761400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 59,758.70 Da | 34.40 | 80.61 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 322 | 358 | 2.09084E-7 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 543 | 1.8E-18 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 322 | 364 | 1.2E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 318 | 365 | 6.98E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 431 | 543 | 6.69E-27 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 281 | 365 | 1.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 414 | 543 | 1.5E-29 | - |
| SMART | SM00181 | egf_5 | 272 | 321 | 250.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 325 | 365 | 4.7E-4 | IPR000742 |
| SMART | SM00179 | egfca_6 | 322 | 365 | 2.1E-9 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 543 | 16.697214 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 322 | 365 | 11.437819 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 340 | 351 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 437 | 459 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 322 | 349 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037449151.1 | wall-associated receptor kinase 4-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6QPN1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology