Basic Information
Locus ID:
Tel6E01G748200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 565793425 | 565798943 | + | Tel6E01G748200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 28,020.84 Da | 49.84 | 97.06 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 1 | 159 | 7.4E-67 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 3 | 158 | 2.56E-23 | IPR027417 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 161 | 215 | 5.49E-6 | IPR023400 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 228 | 2.4E-67 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 92 | 163 | 24.651537 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 1 | 82 | 17.255457 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 104 | 112 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 101 | 129 | 3.1E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 187 | 204 | 3.1E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 53 | 82 | 3.1E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 134 | 163 | 3.1E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 15 | 44 | 3.1E-59 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 239 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_025827587.1 | uncharacterized protein LOC112902654 [Panicum hallii] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UPU2 | DNA repair protein recA homolog 3, mitochondrial OS=Eragrostis curvula OX=38414 GN=EJB05_28260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology