Basic Information
Locus ID:
Tel6E01G746700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 565146474 | 565151420 | - | Tel6E01G746700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 86,250.47 Da | 70.11 | 69.44 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 717 | 757 | 6.40137E-20 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 715 | 762 | 1.9E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 710 | 763 | 5.1E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 707 | 768 | 1.7E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 718 | 757 | 10.822189 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 354 | - | - |
| Coils | Coil | Coil | 450 | 470 | - | - |
| Coils | Coil | Coil | 646 | 666 | - | - |
| Coils | Coil | Coil | 86 | 106 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044405174.1 | uncharacterized protein LOC123129087 [Triticum aestivum] | 0 |
| Q0MW30 | E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus OX=10090 GN=Neurl1b PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NVJ5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology