HalophFGD

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Basic Information
Locus ID: Tel6E01G732600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 558896718 558898214 + Tel6E01G732600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.66 57,035.77 Da 52.66 80.82 -0.46
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 11 48 1.3E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 59 4.71E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 10 52 1.2E-6 -
SMART SM00256 fbox_2 11 51 6.1E-7 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044417086.1 uncharacterized protein LOC123142139 [Triticum aestivum] 0
TrEMBL M8B1S0 Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_4AG0316550, gene-QOZ80_4BG0347750
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.4HG0414150.1.CDS1 ...
HORVU.MOREX.r3.6HG0631070.1.CDS1, HORVU.MOREX.r3.6HG0631130.1.CDS1
Poaceae Lolium multiflorum 17 gene-QYE76_026431, gene-QYE76_026432, gene-QYE76_026433 ...
gene-QYE76_026434, gene-QYE76_026435, gene-QYE76_026436, gene-QYE76_026437, gene-QYE76_044211, gene-QYE76_058039, gene-QYE76_058343, gene-QYE76_058891, gene-QYE76_058907, gene-QYE76_069351, gene-QYE76_071473, gene-QYE76_071475, gene-QYE76_071476, gene-QYE76_071788
Poaceae Oryza coarctata 2 Oco07G006550, Oco11G007950
Poaceae Paspalum vaginatum 1 gene-BS78_06G105400
Poaceae Puccinellia tenuiflora 6 Pt_Chr0100957, Pt_Chr0108093, Pt_Chr0108094, Pt_Chr0604534 ...
Pt_Chr0605851, Pt_Chr0605853
Poaceae Sporobolus alterniflorus 2 Chr23G012460, Chr26G007060
Poaceae Thinopyrum elongatum 2 Tel4E01G588900, Tel6E01G732600
Poaceae Triticum aestivum 17 TraesCS3A02G500300.1, TraesCS3A02G500800.1.cds1 ...
TraesCS3A02G500900.1.cds1, TraesCS3B02G563900.1.cds1, TraesCS3B02G565100.1, TraesCS3B02G565300.1.cds1, TraesCS3D02G507300.1, TraesCS3D02G508300.1.cds1, TraesCS4D02G352300.1, TraesCS5A02G527700.1, TraesCS5A02G527900.1.cds1, TraesCS6A02G398200.1, TraesCS6A02G401400.1.cds1, TraesCS6A02G401800.1.cds1, TraesCS6D02G368600.1.cds1, TraesCSU02G052400.1.cds1, TraesCSU02G191300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.