Basic Information
Locus ID:
Tel6E01G704900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 546981932 | 546986756 | - | Tel6E01G704900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 113,021.52 Da | 41.50 | 97.50 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 215 | 427 | 1.8E-26 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 549 | 858 | 5.49E-17 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 190 | 456 | 7.36E-44 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 183 | 344 | 4.1E-21 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 533 | 884 | 4.1E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 351 | 441 | 1.5E-7 | IPR042197 |
| Gene3D | G3DSA:1.20.5.4130 | - | 21 | 141 | 2.7E-8 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 442 | 525 | 1.3E-8 | IPR036388 |
| PRINTS | PR00364 | Disease resistance protein signature | 388 | 402 | 2.4E-8 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 712 | 728 | 2.4E-8 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 222 | 237 | 2.4E-8 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 289 | 303 | 2.4E-8 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40090.1 | Disease resistance protein (TIR-NBS class). | 0 |
| RefSeq | XP_044954047.1 | disease resistance protein RGA5-like isoform X1 [Hordeum vulgare subsp. vulgare] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7BCR8 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology