Basic Information
Locus ID:
Tel6E01G692400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 542083875 | 542085414 | + | Tel6E01G692400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 32,157.12 Da | 40.29 | 77.92 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 96 | 281 | 1.0E-24 | IPR025886 |
| Pfam | PF00646 | F-box domain | 2 | 44 | 2.4E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 72 | 1.96E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 42 | 9.9E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 44 | 10.292301 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02250.1 | phloem protein 2-B2. | 0 |
| RefSeq | XP_020199098.2 | F-box protein PP2-B11-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9ZVR5 | Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6QNU1 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0628430.1, HORVU.MOREX.r3.6HG0628490.1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_019544, gene-QYE76_026337, gene-QYE76_026338 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0604258, Pt_Chr0604322 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G692400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG056840, gene_TRIDC6BG066470 |
| Poaceae | Triticum aestivum | 9 | TraesCS3A02G082500.1, TraesCS3B02G097600.1 ... |