Basic Information
Locus ID:
Tel6E01G654700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 522292175 | 522293446 | + | Tel6E01G654700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 47,582.18 Da | 49.37 | 85.30 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 51 | 3.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 56 | 2.09E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 60 | 8.0E-7 | - |
| SMART | SM00256 | fbox_2 | 11 | 52 | 0.0011 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 5 | 52 | 9.947874 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044409979.1 | uncharacterized protein LOC123134894 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6PU43 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH05.2918, BH05.1292, BH05.2981, BH08.655, BH08.658 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_8AG0621050, gene-QOZ80_8AG0621070 ... |
| Poaceae | Hordeum vulgare | 12 | HORVU.MOREX.r3.1HG0081260.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 34 | gene-QYE76_007113, gene-QYE76_013869, gene-QYE76_016171 ... |
| Poaceae | Oryza coarctata | 1 | Oco23G005750 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g10340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G079400 |
| Poaceae | Puccinellia tenuiflora | 20 | Pt_Chr0100005, Pt_Chr0100006, Pt_Chr0400333, Pt_Chr0401546 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G016430 |
| Poaceae | Thinopyrum elongatum | 12 | Tel1E01G210900, Tel1E01G537800, Tel1E01G537900 ... |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG051830, gene_TRIDC1AG052480 ... |
| Poaceae | Triticum aestivum | 38 | TraesCS1A02G113500.1, TraesCS1A02G351100.1.cds1 ... |