Basic Information
Locus ID:
Tel6E01G641200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 516055676 | 516056869 | + | Tel6E01G641200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 42,319.32 Da | 38.16 | 87.48 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 58 | 4.5E-11 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 115 | 352 | 8.76E-6 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 84 | 1.13E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 75 | 2.8E-8 | - |
| SMART | SM00256 | fbox_2 | 23 | 63 | 4.5E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 116 | 344 | 8.0E-14 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 63 | 12.067426 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044416997.1 | putative F-box protein At3g10430 [Triticum aestivum] | 0 |
| TrEMBL | A0A0D9WME1 | F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_026268 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G641200 |