Basic Information
Locus ID:
Tel6E01G637400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
CAF1 family ribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 513502656 | 513503823 | - | Tel6E01G637400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 32,082.01 Da | 32.63 | 86.09 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 175 | 257 | 1.2E-5 | IPR006941 |
| Pfam | PF04857 | CAF1 family ribonuclease | 29 | 151 | 5.1E-9 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 22 | 282 | 8.28E-87 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 15 | 284 | 2.5E-97 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_037448733.1 | probable CCR4-associated factor 1 homolog 7 [Triticum dicoccoides] | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | W5GUB4 | poly(A)-specific ribonuclease OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology